WebGestaltR - Gene Set Analysis Toolkit WebGestaltR
The web version WebGestalt <https://www.webgestalt.org> supports 12 organisms, 354 gene identifiers and 321,251 function categories. Users can upload the data and functional categories with their own gene identifiers. In addition to the Over-Representation Analysis, WebGestalt also supports Gene Set Enrichment Analysis and Network Topology Analysis. The user-friendly output report allows interactive and efficient exploration of enrichment results. The WebGestaltR package not only supports all above functions but also can be integrated into other pipeline or simultaneously analyze multiple gene lists.
Last updated 27 days ago
rustcargo
9.18 score 35 stars 180 scripts 748 downloadsclinicalomicsdbR - Interface with the 'ClinicalOmicsDB' API, Allowing for Easy Data Downloading and Importing
Provides an interface to the 'ClinicalOmicsDB' API, allowing for easy data downloading and importing. 'ClinicalOmicsDB' is a database of clinical and 'omics' data from cancer patients. The database is accessible at <http://trials.linkedomics.org>.
Last updated 9 months ago
3.78 score 4 stars 2 scripts 203 downloads